Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Gm11793-201ENSMUST00000120433 981 ntBASIC12.74□□□□□ -0.37
Hoxc4Q08624 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.74□□□□□ -0.37
Hoxc4Q08624 Gm18584-201ENSMUST00000203098 964 ntBASIC12.74□□□□□ -0.37
Hoxc4Q08624 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.74□□□□□ -0.37
Hoxc4Q08624 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.74□□□□□ -0.37
Hoxc4Q08624 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc4Q08624 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm24548-201ENSMUST00000158650 108 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm22121-201ENSMUST00000175148 54 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm27501-201ENSMUST00000183599 107 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Hoxc4Q08624 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Gm9823-201ENSMUST00000051212 327 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc4Q08624 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.73□□□□□ -0.37
Hoxc4Q08624 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc4Q08624 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Mir1247-201ENSMUST00000116706 82 ntBASIC12.72□□□□□ -0.37
Hoxc4Q08624 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm7809-201ENSMUST00000153199 742 ntBASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm43179-201ENSMUST00000198797 275 ntBASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm5781-201ENSMUST00000219792 443 ntBASIC12.72□□□□□ -0.37
Hoxc4Q08624 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms