Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox4Q06831 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox4Q06831 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox4Q06831 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox4Q06831 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox4Q06831 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Gm4984-201ENSMUST00000115987 360 ntBASIC13.08□□□□□ -0.32
Sox4Q06831 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.08□□□□□ -0.32
Sox4Q06831 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.08□□□□□ -0.32
Sox4Q06831 Gm8810-201ENSMUST00000172895 754 ntBASIC13.08□□□□□ -0.32
Sox4Q06831 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.08□□□□□ -0.32
Sox4Q06831 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox4Q06831 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox4Q06831 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox4Q06831 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox4Q06831 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.07□□□□□ -0.32
Sox4Q06831 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.07□□□□□ -0.32
Sox4Q06831 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox4Q06831 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox4Q06831 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Sox4Q06831 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox4Q06831 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox4Q06831 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.07□□□□□ -0.32
Sox4Q06831 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Gm10012-201ENSMUST00000078252 192 ntBASIC13.07□□□□□ -0.32
Sox4Q06831 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox4Q06831 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox4Q06831 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.07□□□□□ -0.32
Sox4Q06831 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox4Q06831 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.07□□□□□ -0.32
Sox4Q06831 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.07□□□□□ -0.32
Sox4Q06831 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox4Q06831 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox4Q06831 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox4Q06831 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.06□□□□□ -0.32
Sox4Q06831 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sox4Q06831 Gm24196-201ENSMUST00000179161 110 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Gm27847-201ENSMUST00000183711 107 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Gm27375-201ENSMUST00000183799 107 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox4Q06831 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.06□□□□□ -0.32
Sox4Q06831 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sox4Q06831 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox4Q06831 Gm6091-201ENSMUST00000098307 165 ntBASIC13.06□□□□□ -0.32
Sox4Q06831 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms