Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Lig3P97386 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.56□□□□□ -0.08
Lig3P97386 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lig3P97386 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.56□□□□□ -0.08
Lig3P97386 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lig3P97386 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.55□□□□□ -0.08
Lig3P97386 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lig3P97386 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.55□□□□□ -0.08
Lig3P97386 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.55□□□□□ -0.08
Lig3P97386 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lig3P97386 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.55□□□□□ -0.08
Lig3P97386 Gm15429-201ENSMUST00000151268 798 ntBASIC14.55□□□□□ -0.08
Lig3P97386 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.55□□□□□ -0.08
Lig3P97386 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.55□□□□□ -0.08
Lig3P97386 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lig3P97386 Gm5370-201ENSMUST00000187187 574 ntBASIC14.55□□□□□ -0.08
Lig3P97386 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Lig3P97386 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.55□□□□□ -0.08
Lig3P97386 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.55□□□□□ -0.08
Lig3P97386 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lig3P97386 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Lig3P97386 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Lig3P97386 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lig3P97386 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.54□□□□□ -0.08
Lig3P97386 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lig3P97386 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.54□□□□□ -0.08
Lig3P97386 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lig3P97386 Gm5187-201ENSMUST00000117317 991 ntBASIC14.54□□□□□ -0.08
Lig3P97386 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.54□□□□□ -0.08
Lig3P97386 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.54□□□□□ -0.08
Lig3P97386 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Lig3P97386 Gm6013-201ENSMUST00000212264 699 ntBASIC14.54□□□□□ -0.08
Lig3P97386 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.54□□□□□ -0.08
Lig3P97386 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.54□□□□□ -0.08
Lig3P97386 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.54□□□□□ -0.08
Lig3P97386 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lig3P97386 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Lig3P97386 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Lig3P97386 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lig3P97386 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms