Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.87□□□□□ -0.51
SgcbP82349 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SgcbP82349 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Gm6152-201ENSMUST00000151704 340 ntBASIC11.87□□□□□ -0.51
SgcbP82349 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.87□□□□□ -0.51
SgcbP82349 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.87□□□□□ -0.51
SgcbP82349 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SgcbP82349 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Gm7287-201ENSMUST00000205267 602 ntBASIC11.87□□□□□ -0.51
SgcbP82349 Gm8463-201ENSMUST00000208573 613 ntBASIC11.87□□□□□ -0.51
SgcbP82349 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.87□□□□□ -0.51
SgcbP82349 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.87□□□□□ -0.51
SgcbP82349 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
SgcbP82349 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcbP82349 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SgcbP82349 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SgcbP82349 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SgcbP82349 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.86□□□□□ -0.51
SgcbP82349 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Gm8602-201ENSMUST00000184045 607 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Gm18187-201ENSMUST00000196476 984 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Gm18473-201ENSMUST00000220543 868 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.86□□□□□ -0.51
SgcbP82349 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.86□□□□□ -0.51
SgcbP82349 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.86□□□□□ -0.51
SgcbP82349 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SgcbP82349 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcbP82349 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.86□□□□□ -0.51
SgcbP82349 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SgcbP82349 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.85□□□□□ -0.51
SgcbP82349 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.85□□□□□ -0.51
SgcbP82349 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.85□□□□□ -0.51
SgcbP82349 Gm27839-201ENSMUST00000184242 106 ntBASIC11.85□□□□□ -0.51
SgcbP82349 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.85□□□□□ -0.51
SgcbP82349 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SgcbP82349 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.85□□□□□ -0.51
SgcbP82349 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
SgcbP82349 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.85□□□□□ -0.51
SgcbP82349 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
SgcbP82349 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms