Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.49□□□□□ -0.25
ThraP63058 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.49□□□□□ -0.25
ThraP63058 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.49□□□□□ -0.25
ThraP63058 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.49□□□□□ -0.25
ThraP63058 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
ThraP63058 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.49□□□□□ -0.25
ThraP63058 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.49□□□□□ -0.25
ThraP63058 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.49□□□□□ -0.25
ThraP63058 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.49□□□□□ -0.25
ThraP63058 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.49□□□□□ -0.25
ThraP63058 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ThraP63058 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ThraP63058 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ThraP63058 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.49□□□□□ -0.25
ThraP63058 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.49□□□□□ -0.25
ThraP63058 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ThraP63058 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
ThraP63058 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ThraP63058 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.48□□□□□ -0.25
ThraP63058 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Gm18905-201ENSMUST00000205454 928 ntBASIC13.48□□□□□ -0.25
ThraP63058 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.48□□□□□ -0.25
ThraP63058 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.48□□□□□ -0.25
ThraP63058 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ThraP63058 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.48□□□□□ -0.25
ThraP63058 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.48□□□□□ -0.25
ThraP63058 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ThraP63058 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.48□□□□□ -0.25
ThraP63058 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ThraP63058 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.48□□□□□ -0.25
ThraP63058 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ThraP63058 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.48□□□□□ -0.25
ThraP63058 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ThraP63058 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ThraP63058 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ThraP63058 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.47□□□□□ -0.25
ThraP63058 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ThraP63058 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ThraP63058 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ThraP63058 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ThraP63058 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.47□□□□□ -0.25
ThraP63058 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Gm5356-201ENSMUST00000093326 615 ntBASIC13.47□□□□□ -0.25
ThraP63058 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.47□□□□□ -0.25
ThraP63058 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ThraP63058 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ThraP63058 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms