Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.75□□□□□ -0.37
Cdkn2bP55271 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.75□□□□□ -0.37
Cdkn2bP55271 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.75□□□□□ -0.37
Cdkn2bP55271 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.75□□□□□ -0.37
Cdkn2bP55271 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.75□□□□□ -0.37
Cdkn2bP55271 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.75□□□□□ -0.37
Cdkn2bP55271 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Gm5161-201ENSMUST00000075243 853 ntBASIC12.75□□□□□ -0.37
Cdkn2bP55271 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdkn2bP55271 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.74□□□□□ -0.37
Cdkn2bP55271 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Gm22175-201ENSMUST00000175007 78 ntBASIC12.74□□□□□ -0.37
Cdkn2bP55271 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Gm19931-201ENSMUST00000198920 368 ntBASIC12.74□□□□□ -0.37
Cdkn2bP55271 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdkn2bP55271 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Gm13453-201ENSMUST00000118708 357 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.73□□□□□ -0.37
Cdkn2bP55271 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 Gm9063-201ENSMUST00000223299 582 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.73□□□□□ -0.37
Cdkn2bP55271 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdkn2bP55271 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms