Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.91□□□□□ -0.5
Abcd3P55096 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.91□□□□□ -0.5
Abcd3P55096 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.91□□□□□ -0.5
Abcd3P55096 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm42550-201ENSMUST00000201553 960 ntBASIC11.91□□□□□ -0.5
Abcd3P55096 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.91□□□□□ -0.5
Abcd3P55096 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.91□□□□□ -0.5
Abcd3P55096 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.91□□□□□ -0.5
Abcd3P55096 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Abcd3P55096 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.91□□□□□ -0.5
Abcd3P55096 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abcd3P55096 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Abcd3P55096 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Abcd3P55096 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.9□□□□□ -0.5
Abcd3P55096 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
Abcd3P55096 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Abcd3P55096 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.9□□□□□ -0.5
Abcd3P55096 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Abcd3P55096 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm28631-201ENSMUST00000190740 334 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Gm38223-201ENSMUST00000194484 695 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.9□□□□□ -0.5
Abcd3P55096 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Abcd3P55096 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Abcd3P55096 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abcd3P55096 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Abcd3P55096 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Abcd3P55096 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abcd3P55096 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.89□□□□□ -0.51
Abcd3P55096 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Abcd3P55096 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Abcd3P55096 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abcd3P55096 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abcd3P55096 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms