Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm37042-201ENSMUST00000193816 581 ntBASIC16.73■□□□□ 0.27
Msh6P54276 Gm32025-201ENSMUST00000217960 307 ntBASIC16.73■□□□□ 0.27
Msh6P54276 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.73■□□□□ 0.27
Msh6P54276 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Msh6P54276 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Msh6P54276 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Msh6P54276 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Msh6P54276 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.72■□□□□ 0.27
Msh6P54276 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Msh6P54276 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Msh6P54276 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.72■□□□□ 0.27
Msh6P54276 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.72■□□□□ 0.27
Msh6P54276 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Msh6P54276 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.72■□□□□ 0.27
Msh6P54276 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Gm43138-201ENSMUST00000199123 708 ntBASIC16.72■□□□□ 0.27
Msh6P54276 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.72■□□□□ 0.27
Msh6P54276 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Msh6P54276 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Msh6P54276 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Msh6P54276 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh6P54276 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Msh6P54276 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.71■□□□□ 0.27
Msh6P54276 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Gm26185-201ENSMUST00000157692 266 ntBASIC16.71■□□□□ 0.27
Msh6P54276 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.71■□□□□ 0.27
Msh6P54276 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Msh6P54276 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Msh6P54276 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.71■□□□□ 0.27
Msh6P54276 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.71■□□□□ 0.27
Msh6P54276 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Msh6P54276 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh6P54276 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Msh6P54276 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Msh6P54276 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Msh6P54276 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.7■□□□□ 0.26
Msh6P54276 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.7■□□□□ 0.26
Msh6P54276 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.7■□□□□ 0.26
Msh6P54276 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.7■□□□□ 0.26
Msh6P54276 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.7■□□□□ 0.26
Msh6P54276 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.7■□□□□ 0.26
Msh6P54276 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh6P54276 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Msh6P54276 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms