Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.04□□□□□ -0.48
Rfx3P48381 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rfx3P48381 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rfx3P48381 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rfx3P48381 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.03□□□□□ -0.48
Rfx3P48381 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Rfx3P48381 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rfx3P48381 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rfx3P48381 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.03□□□□□ -0.48
Rfx3P48381 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Gm27306-201ENSMUST00000183970 107 ntBASIC12.03□□□□□ -0.48
Rfx3P48381 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.03□□□□□ -0.48
Rfx3P48381 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.03□□□□□ -0.48
Rfx3P48381 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.03□□□□□ -0.48
Rfx3P48381 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Rfx3P48381 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfx3P48381 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfx3P48381 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfx3P48381 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rfx3P48381 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfx3P48381 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfx3P48381 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfx3P48381 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rfx3P48381 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfx3P48381 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rfx3P48381 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Rfx3P48381 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfx3P48381 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfx3P48381 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.02□□□□□ -0.49
Rfx3P48381 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.02□□□□□ -0.49
Rfx3P48381 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Gm27989-201ENSMUST00000184721 107 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Gm18905-201ENSMUST00000205454 928 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfx3P48381 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Rfx3P48381 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rfx3P48381 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rfx3P48381 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.02□□□□□ -0.49
Rfx3P48381 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.02□□□□□ -0.49
Rfx3P48381 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rfx3P48381 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rfx3P48381 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfx3P48381 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.01□□□□□ -0.49
Rfx3P48381 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfx3P48381 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms