Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gm17795-201ENSMUST00000214505 757 ntBASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gm9063-201ENSMUST00000223299 582 ntBASIC12.86□□□□□ -0.35
Tnfsf4P43488 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.86□□□□□ -0.35
Tnfsf4P43488 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.86□□□□□ -0.35
Tnfsf4P43488 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm13223-201ENSMUST00000118609 747 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm12403-201ENSMUST00000121384 959 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.85□□□□□ -0.35
Tnfsf4P43488 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf4P43488 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.84□□□□□ -0.35
Tnfsf4P43488 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.84□□□□□ -0.35
Tnfsf4P43488 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf4P43488 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms