Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
HttP42859 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.77□□□□□ -0.21
HttP42859 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HttP42859 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HttP42859 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HttP42859 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.77□□□□□ -0.21
HttP42859 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HttP42859 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.77□□□□□ -0.21
HttP42859 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HttP42859 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.77□□□□□ -0.21
HttP42859 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HttP42859 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HttP42859 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.77□□□□□ -0.21
HttP42859 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.77□□□□□ -0.21
HttP42859 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Gm11979-201ENSMUST00000119629 743 ntBASIC13.76□□□□□ -0.21
HttP42859 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.76□□□□□ -0.21
HttP42859 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
HttP42859 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HttP42859 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HttP42859 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HttP42859 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HttP42859 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.76□□□□□ -0.21
HttP42859 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.76□□□□□ -0.21
HttP42859 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.76□□□□□ -0.21
HttP42859 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Gm43962-201ENSMUST00000203898 190 ntBASIC13.76□□□□□ -0.21
HttP42859 Gm14005-208ENSMUST00000223654 681 ntBASIC13.76□□□□□ -0.21
HttP42859 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.76□□□□□ -0.21
HttP42859 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.76□□□□□ -0.21
HttP42859 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HttP42859 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HttP42859 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.75□□□□□ -0.21
HttP42859 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.75□□□□□ -0.21
HttP42859 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HttP42859 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HttP42859 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HttP42859 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.75□□□□□ -0.21
HttP42859 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HttP42859 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Gm13022-201ENSMUST00000121181 285 ntBASIC13.75□□□□□ -0.21
HttP42859 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.75□□□□□ -0.21
HttP42859 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.75□□□□□ -0.21
HttP42859 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.75□□□□□ -0.21
HttP42859 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.75□□□□□ -0.21
HttP42859 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
HttP42859 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.75□□□□□ -0.21
HttP42859 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HttP42859 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.75□□□□□ -0.21
HttP42859 Gm16166-201ENSMUST00000118291 787 ntBASIC13.75□□□□□ -0.21
HttP42859 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.75□□□□□ -0.21
HttP42859 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.75□□□□□ -0.21
HttP42859 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Gm25201-201ENSMUST00000083093 170 ntBASIC13.75□□□□□ -0.21
HttP42859 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HttP42859 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.74□□□□□ -0.21
HttP42859 Gm16071-201ENSMUST00000119589 793 ntBASIC13.74□□□□□ -0.21
HttP42859 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.74□□□□□ -0.21
HttP42859 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms