Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.61□□□□□ -0.23
Cxcl12P40224 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Gm9211-201ENSMUST00000182882 975 ntBASIC13.61□□□□□ -0.23
Cxcl12P40224 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.61□□□□□ -0.23
Cxcl12P40224 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl12P40224 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl12P40224 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cxcl12P40224 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cxcl12P40224 Gm13875-201ENSMUST00000120162 282 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 Gm11978-201ENSMUST00000122315 466 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.6□□□□□ -0.23
Cxcl12P40224 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Cxcl12P40224 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.6□□□□□ -0.23
Cxcl12P40224 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.6□□□□□ -0.23
Cxcl12P40224 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cxcl12P40224 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cxcl12P40224 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Gm22121-201ENSMUST00000175148 54 ntBASIC13.59□□□□□ -0.23
Cxcl12P40224 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.59□□□□□ -0.23
Cxcl12P40224 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.59□□□□□ -0.23
Cxcl12P40224 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Gm8712-201ENSMUST00000221090 701 ntBASIC13.59□□□□□ -0.23
Cxcl12P40224 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.59□□□□□ -0.23
Cxcl12P40224 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.59□□□□□ -0.23
Cxcl12P40224 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cxcl12P40224 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms