Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm14726-201ENSMUST00000120623 896 ntBASIC12.25□□□□□ -0.45
Sftpa1P35242 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.25□□□□□ -0.45
Sftpa1P35242 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.25□□□□□ -0.45
Sftpa1P35242 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.25□□□□□ -0.45
Sftpa1P35242 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.25□□□□□ -0.45
Sftpa1P35242 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Sftpa1P35242 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sftpa1P35242 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm11439-201ENSMUST00000118598 409 ntBASIC12.24□□□□□ -0.45
Sftpa1P35242 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sftpa1P35242 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.24□□□□□ -0.45
Sftpa1P35242 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.24□□□□□ -0.45
Sftpa1P35242 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.24□□□□□ -0.45
Sftpa1P35242 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
Sftpa1P35242 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sftpa1P35242 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sftpa1P35242 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sftpa1P35242 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sftpa1P35242 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sftpa1P35242 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms