Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.64□□□□□ -0.23
Mmp13P33435 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm5425-201ENSMUST00000214125 459 ntBASIC13.64□□□□□ -0.23
Mmp13P33435 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm9797-201ENSMUST00000052902 613 ntBASIC13.64□□□□□ -0.23
Mmp13P33435 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.64□□□□□ -0.23
Mmp13P33435 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Mmp13P33435 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Mmp13P33435 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp13P33435 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.63□□□□□ -0.23
Mmp13P33435 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.63□□□□□ -0.23
Mmp13P33435 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Mmp13P33435 Gm28760-201ENSMUST00000185995 736 ntBASIC13.63□□□□□ -0.23
Mmp13P33435 Gm10766-202ENSMUST00000194123 606 ntBASIC13.63□□□□□ -0.23
Mmp13P33435 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.63□□□□□ -0.23
Mmp13P33435 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Mmp13P33435 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Mmp13P33435 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.63□□□□□ -0.23
Mmp13P33435 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp13P33435 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.63□□□□□ -0.23
Mmp13P33435 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Mmp13P33435 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Mmp13P33435 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp13P33435 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.62□□□□□ -0.23
Mmp13P33435 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.62□□□□□ -0.23
Mmp13P33435 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp13P33435 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp13P33435 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Mmp13P33435 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Mmp13P33435 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mmp13P33435 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp13P33435 Gm42612-201ENSMUST00000197986 623 ntBASIC13.62□□□□□ -0.23
Mmp13P33435 Gm43170-201ENSMUST00000199827 612 ntBASIC13.62□□□□□ -0.23
Mmp13P33435 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Mmp13P33435 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp13P33435 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Mmp13P33435 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Mmp13P33435 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Mmp13P33435 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp13P33435 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.61□□□□□ -0.23
Mmp13P33435 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.61□□□□□ -0.23
Mmp13P33435 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.61□□□□□ -0.23
Mmp13P33435 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms