Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.79□□□□□ -0.36
BdnfP21237 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.79□□□□□ -0.36
BdnfP21237 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.79□□□□□ -0.36
BdnfP21237 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.79□□□□□ -0.36
BdnfP21237 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BdnfP21237 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BdnfP21237 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.79□□□□□ -0.36
BdnfP21237 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BdnfP21237 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BdnfP21237 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BdnfP21237 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
BdnfP21237 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.78□□□□□ -0.36
BdnfP21237 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
BdnfP21237 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BdnfP21237 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BdnfP21237 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
BdnfP21237 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
BdnfP21237 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
BdnfP21237 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.77□□□□□ -0.36
BdnfP21237 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
BdnfP21237 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BdnfP21237 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Gm13223-201ENSMUST00000118609 747 ntBASIC12.77□□□□□ -0.37
BdnfP21237 Gm13616-201ENSMUST00000120600 222 ntBASIC12.77□□□□□ -0.37
BdnfP21237 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.77□□□□□ -0.37
BdnfP21237 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.77□□□□□ -0.37
BdnfP21237 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.77□□□□□ -0.37
BdnfP21237 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
BdnfP21237 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BdnfP21237 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BdnfP21237 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
BdnfP21237 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.77□□□□□ -0.37
BdnfP21237 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BdnfP21237 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.76□□□□□ -0.37
BdnfP21237 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BdnfP21237 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms