Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Ccl3P10855 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccl3P10855 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccl3P10855 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccl3P10855 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Gm26956-201ENSMUST00000182176 986 ntBASIC11.69□□□□□ -0.54
Ccl3P10855 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.69□□□□□ -0.54
Ccl3P10855 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.69□□□□□ -0.54
Ccl3P10855 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.69□□□□□ -0.54
Ccl3P10855 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccl3P10855 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Ccl3P10855 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccl3P10855 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccl3P10855 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.68□□□□□ -0.54
Ccl3P10855 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.68□□□□□ -0.54
Ccl3P10855 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccl3P10855 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.68□□□□□ -0.54
Ccl3P10855 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.68□□□□□ -0.54
Ccl3P10855 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccl3P10855 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccl3P10855 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.68□□□□□ -0.54
Ccl3P10855 Gm31256-201ENSMUST00000194705 506 ntBASIC11.68□□□□□ -0.54
Ccl3P10855 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.68□□□□□ -0.54
Ccl3P10855 Gm3786-201ENSMUST00000202659 378 ntBASIC11.68□□□□□ -0.54
Ccl3P10855 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Ccl3P10855 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccl3P10855 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.68□□□□□ -0.54
Ccl3P10855 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl3P10855 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Ccl3P10855 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.67□□□□□ -0.54
Ccl3P10855 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccl3P10855 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Ccl3P10855 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.67□□□□□ -0.54
Ccl3P10855 Gm24830-201ENSMUST00000102024 166 ntBASIC11.67□□□□□ -0.54
Ccl3P10855 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl3P10855 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.67□□□□□ -0.54
Ccl3P10855 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms