Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gm13612-201ENSMUST00000119276 390 ntBASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gm6152-201ENSMUST00000151704 340 ntBASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gm8652-201ENSMUST00000181363 964 ntBASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gm43222-201ENSMUST00000199013 603 ntBASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Itm2b-204ENSMUST00000228637 783 ntBASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ly6c1P0CW02 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm14579-201ENSMUST00000117068 283 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm8312-201ENSMUST00000119380 618 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm29288-201ENSMUST00000191582 901 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm18473-201ENSMUST00000220543 868 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm8598-201ENSMUST00000221184 836 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ly6c1P0CW02 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ly6c1P0CW02 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms