Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.16□□□□□ -0.3
Pdlim1O70400 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.15□□□□□ -0.3
Pdlim1O70400 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.15□□□□□ -0.3
Pdlim1O70400 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.15□□□□□ -0.3
Pdlim1O70400 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.15□□□□□ -0.3
Pdlim1O70400 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Gm8213-201ENSMUST00000118191 441 ntBASIC13.15□□□□□ -0.3
Pdlim1O70400 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.15□□□□□ -0.3
Pdlim1O70400 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.15□□□□□ -0.3
Pdlim1O70400 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.15□□□□□ -0.3
Pdlim1O70400 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pdlim1O70400 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim1O70400 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim1O70400 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim1O70400 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pdlim1O70400 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm27486-201ENSMUST00000184923 80 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm10012-201ENSMUST00000078252 192 ntBASIC13.14□□□□□ -0.31
Pdlim1O70400 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdlim1O70400 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim1O70400 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.13□□□□□ -0.31
Pdlim1O70400 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms