Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Gm7029-201ENSMUST00000173226 450 ntBASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Gm27682-201ENSMUST00000183930 110 ntBASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb9E9Q5G2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Mir874-201ENSMUST00000104769 76 ntBASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Gm28693-202ENSMUST00000190758 331 ntBASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 AY702102-202ENSMUST00000194651 1173 ntBASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb9E9Q5G2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Gm1335-201ENSMUST00000121653 386 ntBASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb9E9Q5G2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms