Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm4875-201ENSMUST00000118257 786 ntBASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Mir7684-201ENSMUST00000183858 60 ntBASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Gm27989-201ENSMUST00000184721 107 ntBASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Gm10766-202ENSMUST00000194123 606 ntBASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm28043E0CXC2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Mir8102-201ENSMUST00000184148 139 ntBASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Gm5425-201ENSMUST00000214125 459 ntBASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm28043E0CXC2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.34□□□□□ -0.27
Gm28043E0CXC2 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm28043E0CXC2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms