Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm24659-201ENSMUST00000180212 110 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm24169-201ENSMUST00000180244 110 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm23689-201ENSMUST00000180354 110 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm27359-201ENSMUST00000184153 110 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm27785-201ENSMUST00000184268 110 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm27466-201ENSMUST00000184396 110 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm27703-201ENSMUST00000184836 110 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm10253-201ENSMUST00000194270 940 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm44335-201ENSMUST00000196879 141 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm44297-201ENSMUST00000198304 141 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm44346-201ENSMUST00000198851 141 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm43125-201ENSMUST00000201724 730 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.24□□□□□ -0.77
PdfS4R2K0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.24□□□□□ -0.77
PdfS4R2K0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PdfS4R2K0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm2810-201ENSMUST00000118681 990 ntBASIC10.23□□□□□ -0.77
PdfS4R2K0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm24158-201ENSMUST00000175263 71 ntBASIC10.23□□□□□ -0.77
PdfS4R2K0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.23□□□□□ -0.77
PdfS4R2K0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm20553-201ENSMUST00000204205 844 ntBASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.23□□□□□ -0.77
PdfS4R2K0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.23□□□□□ -0.77
PdfS4R2K0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.23□□□□□ -0.77
PdfS4R2K0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.23□□□□□ -0.77
PdfS4R2K0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PdfS4R2K0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.23□□□□□ -0.77
PdfS4R2K0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.22□□□□□ -0.77
PdfS4R2K0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.22□□□□□ -0.77
PdfS4R2K0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PdfS4R2K0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms