Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cldn9Q9Z0S7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Gm29608-201ENSMUST00000190444 463 ntBASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn9Q9Z0S7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gm44855-201ENSMUST00000205725 362 ntBASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn9Q9Z0S7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn9Q9Z0S7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms