Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Mir686-201ENSMUST00000102174 109 ntBASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Gm16479-201ENSMUST00000121706 932 ntBASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Mir7221-201ENSMUST00000184009 72 ntBASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Gm38002-201ENSMUST00000193255 180 ntBASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Gm7399-201ENSMUST00000032395 858 ntBASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcb1Q9Z0H3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm26185-201ENSMUST00000157692 266 ntBASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm45880-201ENSMUST00000213041 853 ntBASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcb1Q9Z0H3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms