Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gm38158-201ENSMUST00000194617 339 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gm19163-201ENSMUST00000223313 780 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Gm25261-201ENSMUST00000157416 134 ntBASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn8aQ9WTU3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Gm24548-201ENSMUST00000158650 108 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn8aQ9WTU3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms