Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcn2Q9R0A1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Gm9797-201ENSMUST00000052902 613 ntBASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Clcn2Q9R0A1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcn2Q9R0A1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms