Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm11531-201ENSMUST00000117614 555 ntBASIC15.53■□□□□ 0.08
Scn11aQ9R053 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Scn11aQ9R053 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn11aQ9R053 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn11aQ9R053 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gm8566-201ENSMUST00000120174 465 ntBASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gm27438-201ENSMUST00000183480 110 ntBASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gm8885-201ENSMUST00000189382 598 ntBASIC15.52■□□□□ 0.07
Scn11aQ9R053 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gm37835-201ENSMUST00000193305 361 ntBASIC15.52■□□□□ 0.07
Scn11aQ9R053 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Scn11aQ9R053 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Gm14208-201ENSMUST00000119645 678 ntBASIC15.51■□□□□ 0.07
Scn11aQ9R053 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Gm13665-201ENSMUST00000120830 528 ntBASIC15.51■□□□□ 0.07
Scn11aQ9R053 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.51■□□□□ 0.07
Scn11aQ9R053 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Gm38317-201ENSMUST00000195564 343 ntBASIC15.51■□□□□ 0.07
Scn11aQ9R053 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn11aQ9R053 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Gm14130-201ENSMUST00000118417 987 ntBASIC15.5■□□□□ 0.07
Scn11aQ9R053 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scn11aQ9R053 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.5■□□□□ 0.07
Scn11aQ9R053 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn11aQ9R053 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms