Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm15770-201ENSMUST00000117498 584 ntBASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm9797-201ENSMUST00000052902 613 ntBASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a2Q9JLR1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61a2Q9JLR1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Rubie-203ENSMUST00000227803 2430 ntBASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61a2Q9JLR1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61a2Q9JLR1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms