Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Gm5187-201ENSMUST00000117317 991 ntBASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Gm43630-201ENSMUST00000201550 776 ntBASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Snora73a-201ENSMUST00000082453 205 ntBASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ube3bQ9ES34 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.79■□□□□ 0.12
Ube3bQ9ES34 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Gm44882-201ENSMUST00000205702 802 ntBASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ube3bQ9ES34 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Gm13392-201ENSMUST00000117708 150 ntBASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Gm8062-201ENSMUST00000139696 444 ntBASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Gm9899-201ENSMUST00000065519 555 ntBASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ube3bQ9ES34 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ube3bQ9ES34 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms