Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Mir874-201ENSMUST00000104769 76 ntBASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Gm16198-201ENSMUST00000118766 670 ntBASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hmg20aQ9DC33 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.15□□□□□ -0.46
Hmg20aQ9DC33 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Hmg20aQ9DC33 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hmg20aQ9DC33 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmg20aQ9DC33 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Gm16026-204ENSMUST00000162652 683 ntBASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms