Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssu72Q9CY97 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Gm25911-201ENSMUST00000157621 56 ntBASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Gm43474-201ENSMUST00000196415 774 ntBASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Ssu72Q9CY97 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Gm24447-201ENSMUST00000083977 338 ntBASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.22□□□□□ -0.29
Ssu72Q9CY97 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms