Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Otud1Q9CUB6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm14350-201ENSMUST00000116642 640 ntBASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm22331-201ENSMUST00000158066 136 ntBASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Otud1Q9CUB6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Gm6447-201ENSMUST00000118905 835 ntBASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Gm18062-201ENSMUST00000208020 547 ntBASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Gm18055-201ENSMUST00000208254 547 ntBASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Otud1Q9CUB6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Otud1Q9CUB6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms