Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sft2d3Q9CSV6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sft2d3Q9CSV6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sft2d3Q9CSV6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sft2d3Q9CSV6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sft2d3Q9CSV6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sft2d3Q9CSV6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sft2d3Q9CSV6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gm14127-201ENSMUST00000117906 678 ntBASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gm27701-201ENSMUST00000184498 110 ntBASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gm43433-201ENSMUST00000196573 481 ntBASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sft2d3Q9CSV6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gm15806-201ENSMUST00000120696 955 ntBASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gm27772-201ENSMUST00000184900 187 ntBASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Mir7654-201ENSMUST00000185082 70 ntBASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gm28911-201ENSMUST00000188837 117 ntBASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gm29741-201ENSMUST00000192667 421 ntBASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sft2d3Q9CSV6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms