Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gm7787-201ENSMUST00000216858 688 ntBASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chchd1Q9CQA6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 AC139350.3-201ENSMUST00000226151 420 ntBASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Chchd1Q9CQA6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms