Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Krt88Q9CPR6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Krt88Q9CPR6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm4995-201ENSMUST00000117247 432 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm13015-201ENSMUST00000118674 204 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm9824-201ENSMUST00000178707 561 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm33320-201ENSMUST00000192232 530 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.02□□□□□ -0.49
Krt88Q9CPR6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Gm15770-201ENSMUST00000117498 584 ntBASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Krt88Q9CPR6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Gm26616-202ENSMUST00000195676 3107 ntBASIC12□□□□□ -0.49
Krt88Q9CPR6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Krt88Q9CPR6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Krt88Q9CPR6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms