Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim16Q99PP9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim16Q99PP9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim16Q99PP9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim16Q99PP9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim16Q99PP9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Mir698-201ENSMUST00000102164 109 ntBASIC13.05□□□□□ -0.32
Trim16Q99PP9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.05□□□□□ -0.32
Trim16Q99PP9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm2423-201ENSMUST00000074863 733 ntBASIC13.05□□□□□ -0.32
Trim16Q99PP9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.05□□□□□ -0.32
Trim16Q99PP9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim16Q99PP9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.04□□□□□ -0.32
Trim16Q99PP9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trim16Q99PP9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.04□□□□□ -0.32
Trim16Q99PP9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim16Q99PP9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim16Q99PP9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.03□□□□□ -0.32
Trim16Q99PP9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim16Q99PP9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms