Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm5161-201ENSMUST00000075243 853 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.16□□□□□ -0.46
Lims1Q99JW4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.16□□□□□ -0.46
Lims1Q99JW4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Gm17837-201ENSMUST00000186435 985 ntBASIC12.16□□□□□ -0.46
Lims1Q99JW4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.16□□□□□ -0.46
Lims1Q99JW4 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.16□□□□□ -0.46
Lims1Q99JW4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lims1Q99JW4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.15□□□□□ -0.46
Lims1Q99JW4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.15□□□□□ -0.46
Lims1Q99JW4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.15□□□□□ -0.46
Lims1Q99JW4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.15□□□□□ -0.46
Lims1Q99JW4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lims1Q99JW4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms