Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gm8396-201ENSMUST00000057361 823 ntBASIC13.43□□□□□ -0.26
Cdk9Q99J95 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cdk9Q99J95 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.42□□□□□ -0.26
Cdk9Q99J95 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.42□□□□□ -0.26
Cdk9Q99J95 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.42□□□□□ -0.26
Cdk9Q99J95 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm18889-201ENSMUST00000174284 929 ntBASIC13.42□□□□□ -0.26
Cdk9Q99J95 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm45453-201ENSMUST00000211758 853 ntBASIC13.42□□□□□ -0.26
Cdk9Q99J95 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.42□□□□□ -0.26
Cdk9Q99J95 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdk9Q99J95 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm14701-201ENSMUST00000117156 348 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm44335-201ENSMUST00000196879 141 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm44297-201ENSMUST00000198304 141 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm44346-201ENSMUST00000198851 141 ntBASIC13.41□□□□□ -0.26
Cdk9Q99J95 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms