Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Gm45384-201ENSMUST00000210451 277 ntBASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdha3Q91Y16 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pcdha3Q91Y16 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdha3Q91Y16 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Pcdha3Q91Y16 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha3Q91Y16 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha3Q91Y16 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdha3Q91Y16 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.95□□□□□ -0.18
Pcdha3Q91Y16 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm15806-201ENSMUST00000120696 955 ntBASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm15429-201ENSMUST00000151268 798 ntBASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm9002-201ENSMUST00000178437 499 ntBASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Gm38144-201ENSMUST00000192790 465 ntBASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha3Q91Y16 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha3Q91Y16 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 186.3 ms