Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Tram1Q91V04 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.45□□□□□ -0.58
Tram1Q91V04 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.45□□□□□ -0.58
Tram1Q91V04 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.45□□□□□ -0.58
Tram1Q91V04 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.45□□□□□ -0.58
Tram1Q91V04 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tram1Q91V04 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tram1Q91V04 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.45□□□□□ -0.58
Tram1Q91V04 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tram1Q91V04 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.44□□□□□ -0.58
Tram1Q91V04 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.44□□□□□ -0.58
Tram1Q91V04 Gm14140-201ENSMUST00000119999 995 ntBASIC11.44□□□□□ -0.58
Tram1Q91V04 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.44□□□□□ -0.58
Tram1Q91V04 Gm18057-201ENSMUST00000208220 503 ntBASIC11.44□□□□□ -0.58
Tram1Q91V04 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.44□□□□□ -0.58
Tram1Q91V04 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.44□□□□□ -0.58
Tram1Q91V04 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tram1Q91V04 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tram1Q91V04 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms