Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Gm22189-201ENSMUST00000103822 86 ntBASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Gm45841-201ENSMUST00000207700 164 ntBASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Gm43703-201ENSMUST00000200523 763 ntBASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Gm18624-201ENSMUST00000220966 658 ntBASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps4aQ8VEJ9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Gm9797-201ENSMUST00000052902 613 ntBASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps4aQ8VEJ9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4aQ8VEJ9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms