Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpa1Q8VEE4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rpa1Q8VEE4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms