Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkd2Q8VE28 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Gm15678-201ENSMUST00000117573 960 ntBASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Gm43630-201ENSMUST00000201550 776 ntBASIC12.17□□□□□ -0.46
Nkd2Q8VE28 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.17□□□□□ -0.46
Nkd2Q8VE28 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkd2Q8VE28 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Gm2445-201ENSMUST00000182798 989 ntBASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Gm18905-201ENSMUST00000205454 928 ntBASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkd2Q8VE28 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.16□□□□□ -0.46
Nkd2Q8VE28 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms