Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Gm12485-201ENSMUST00000119641 291 ntBASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.36□□□□□ -0.27
Vps39Q8R5L3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vps39Q8R5L3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gm21854-201ENSMUST00000179901 471 ntBASIC13.35□□□□□ -0.27
Vps39Q8R5L3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gm38144-201ENSMUST00000192790 465 ntBASIC13.35□□□□□ -0.27
Vps39Q8R5L3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.35□□□□□ -0.27
Vps39Q8R5L3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps39Q8R5L3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm15920-201ENSMUST00000118998 402 ntBASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Gm9797-201ENSMUST00000052902 613 ntBASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps39Q8R5L3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms