Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup35Q8R4R6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Mir1895-201ENSMUST00000122615 79 ntBASIC10.85□□□□□ -0.67
Nup35Q8R4R6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup35Q8R4R6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Gm15653-201ENSMUST00000119247 907 ntBASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Gm13365-201ENSMUST00000121188 973 ntBASIC10.84□□□□□ -0.67
Nup35Q8R4R6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Gm10766-202ENSMUST00000194123 606 ntBASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Gm5425-201ENSMUST00000214125 459 ntBASIC10.84□□□□□ -0.67
Nup35Q8R4R6 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.84□□□□□ -0.67
Nup35Q8R4R6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms