Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Gm15371-201ENSMUST00000117057 784 ntBASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Grk6-205ENSMUST00000224653 2976 ntBASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim29Q8R2Q0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm7488-201ENSMUST00000117148 684 ntBASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm5866-201ENSMUST00000177881 973 ntBASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm38223-201ENSMUST00000194484 695 ntBASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm18307-201ENSMUST00000206864 949 ntBASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim29Q8R2Q0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms