Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf39Q8K2Z2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Prpf39Q8K2Z2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Prpf39Q8K2Z2 Grk6-205ENSMUST00000224653 2976 ntBASIC13.83□□□□□ -0.19
Prpf39Q8K2Z2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.83□□□□□ -0.19
Prpf39Q8K2Z2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Prpf39Q8K2Z2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Mir7221-201ENSMUST00000184009 72 ntBASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Gm6745-201ENSMUST00000199216 526 ntBASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf39Q8K2Z2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Gm9908-201ENSMUST00000211534 448 ntBASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf39Q8K2Z2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf39Q8K2Z2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms