Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Gm26464-201ENSMUST00000157094 305 ntBASIC16.48■□□□□ 0.23
Smc5Q8CG46 Gm43575-201ENSMUST00000196420 516 ntBASIC16.48■□□□□ 0.23
Smc5Q8CG46 Gm2213-201ENSMUST00000197485 688 ntBASIC16.48■□□□□ 0.23
Smc5Q8CG46 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Gm26308-201ENSMUST00000157768 69 ntBASIC16.47■□□□□ 0.23
Smc5Q8CG46 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Gm9522-201ENSMUST00000182394 926 ntBASIC16.47■□□□□ 0.23
Smc5Q8CG46 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.47■□□□□ 0.23
Smc5Q8CG46 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.47■□□□□ 0.23
Smc5Q8CG46 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smc5Q8CG46 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.46■□□□□ 0.23
Smc5Q8CG46 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.46■□□□□ 0.23
Smc5Q8CG46 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.46■□□□□ 0.23
Smc5Q8CG46 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Gm27306-201ENSMUST00000183970 107 ntBASIC16.46■□□□□ 0.23
Smc5Q8CG46 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Smc5Q8CG46 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.46■□□□□ 0.23
Smc5Q8CG46 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Smc5Q8CG46 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.46■□□□□ 0.23
Smc5Q8CG46 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc5Q8CG46 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smc5Q8CG46 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.46■□□□□ 0.22
Smc5Q8CG46 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Smc5Q8CG46 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Smc5Q8CG46 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smc5Q8CG46 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Smc5Q8CG46 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc5Q8CG46 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms