Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Gm37917-201ENSMUST00000194711 392 ntBASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf3Q8C120 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sh3rf3Q8C120 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Gm18624-201ENSMUST00000220966 658 ntBASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf3Q8C120 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Gm19220-201ENSMUST00000222682 803 ntBASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sh3rf3Q8C120 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms