Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Gm6218-201ENSMUST00000219812 628 ntBASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Gm13385-201ENSMUST00000121089 220 ntBASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trerf1Q8BXJ2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.1□□□□□ -0.15
Trerf1Q8BXJ2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms