Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpne3Q8BT60 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cpne3Q8BT60 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Cpne3Q8BT60 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm17795-201ENSMUST00000214505 757 ntBASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpne3Q8BT60 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cpne3Q8BT60 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms